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cellxgene-census

8.7

by davila7

155Favorites
307Upvotes
0Downvotes

Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with scanpy/PyTorch, for population-scale single-cell analysis.

bioinformatics

8.7

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0

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Data & Analytics

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Quick Review

Excellent skill for accessing the CZ CELLxGENE Census database. The description clearly conveys the capability to query 61M+ cells with filtering and integration options. The SKILL.md is exceptionally well-structured with progressive complexity (exploration → small queries → large-scale → ML integration), comprehensive code examples, and clear best practices (e.g., always filter is_primary_data). Task knowledge is outstanding with concrete workflows for memory-efficient processing, PyTorch dataloaders, and scanpy integration. The skill addresses a highly specialized, compute-intensive domain where a CLI agent would struggle with API complexity, memory management, and domain-specific filtering syntax, providing significant token cost savings. Structure is clean with a logical overview, core patterns, best practices, and supplementary reference files. Minor room for improvement in making the description slightly more explicit about out-of-core capabilities.

LLM Signals

Description coverage9
Task knowledge10
Structure9
Novelty9

GitHub Signals

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Last commit 0 days ago

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davila7

davila7

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