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matchms

8.0

by davila7

140Favorites
410Upvotes
0Downvotes

Mass spectrometry analysis. Process mzML/MGF/MSP, spectral similarity (cosine, modified cosine), metadata harmonization, compound ID, for metabolomics and MS data processing.

mass-spectrometry

8.0

Rating

0

Installs

Data & Analytics

Category

Quick Review

Excellent skill for mass spectrometry analysis. The description clearly covers importing/exporting multiple formats (mzML/MGF/MSP), spectral similarity calculations (cosine variants), filtering, and metadata harmonization. Code examples are practical and demonstrate core workflows. The structure is well-organized with a clean overview in SKILL.md and detailed references segregated appropriately. A CLI agent can easily invoke capabilities based on the description and examples. Novelty is moderate-to-high: while Python libraries exist, mass spectrometry workflows involve complex multi-step processing, format handling, and domain-specific similarity metrics that would consume many tokens for a CLI agent to implement from scratch. Minor room for improvement in explicitly documenting edge cases or error handling, but overall a high-quality, immediately usable skill.

LLM Signals

Description coverage9
Task knowledge9
Structure9
Novelty7

GitHub Signals

18,069
1,635
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71
Last commit 0 days ago

Publisher

davila7

davila7

Skill Author

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davila7

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