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string-database

8.3

by K-Dense-AI

198Favorites
271Upvotes
0Downvotes

Query STRING API for protein-protein interactions (59M proteins, 20B interactions). Network analysis, GO/KEGG enrichment, interaction discovery, 5000+ species, for systems biology.

bioinformatics

8.3

Rating

0

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Data & Analytics

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Quick Review

Exceptional bioinformatics skill providing comprehensive access to STRING protein-protein interaction database. The description is crystal clear and sufficient for CLI invocation. Task knowledge is outstanding with 8 detailed API operations, 5 complete workflows, parameter guidance, confidence score interpretation, troubleshooting, and best practices. Structure is excellent with logical organization, clear operation categorization, and comprehensive quick-start guidance, though the single-file format is slightly lengthy. Novelty is strong: querying 59M proteins across 20B interactions, performing statistical enrichment analysis, and generating network visualizations would require substantial token investment and API expertise for a CLI agent alone. Minor improvement possible by splitting workflows into separate reference files, but current structure remains highly effective.

LLM Signals

Description coverage10
Task knowledge10
Structure9
Novelty8

GitHub Signals

6,869
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Last commit 1 days ago

Publisher

K-Dense-AI

K-Dense-AI

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